I'll share what I know of flow, doesn't come from cylinder heads, comes from designing gating for castings. But flow is flow, air or liquid.
Lets say you've got 2 pieces of pipe you're flowing thru.
One is 2.5 diameter, 3 feet long.
The other is 3.0 diameter, also 3 ft long, but necks down to 2.5 in the middle briefly, then flares back out to 3.0.
Both pipes have a the same minimum cross section of 2.5 diameter.
But every time, the 3" pipe that necks down to 2.5 briefly will flow more volume. Every time.
Thus flow is more than minimum cross section area, it's also relative to the length of the minimum cross section.
Can't really add any more to the conversation, I'm just happy to actually know something relevant in this forum
